Includes bibliographical references and index.

Introduction to proteomics / Friedrich Lottspeich -- High- resolution two-dimensional electrophoresis / Walter Weiss and Angelika Görg -- Non-classical 2-D electrophoresis / Jacqueline Burré, Ilka Wittig, and Hermann Schägger -- Protein detection and quantitation technologeis for gel-based proteome analysis / Walter Weiss, Florian Weiland, and Angelika Görg -- MALDI MS / Rainer Cramer -- Capillaryelectrophoresis coupled to mass spectrometry for proteomicprofiling of human urine and biomarker discovery / Petra Zürbig, Eric Schiffer, and Harald Mischak -- A newcomer's guide to nano-liquid-chromatography of peptides / Thomas Fröhlich and Georg J. Arnold -- Multidimensional protein identification technology / Katharina Lohrig and Dirk wolters -- Characterization of platelet proteins using peptide centric proteomics / Oliver Simon, Stefanie Wortelkamp, and Albert Sickmann -- Identification of the molecular composition of the 20S proteasome of mouse intestine by high-resolution mass spectrometric proteome analysis / Reinhold Weber ... [et al.] -- Liquid chromatography-mass spectrometry-based quantitative proteomics / Michael W. Linscheid ... [et al.] -- iTRAQ-labeling of in-gel digested proteins for relative quantification / Carla Schmidt and Henning Urlaub -- Electrospray mass spectrometry for quantitative plasma proteome analysis / Hong Wang and Sam Hannash -- Algorithms and databases / Lennart Martens and Rolf Apweiler -- Shotgun protein identification and quantification by mass spectrometry / Bingwen Lu ... [et al.] -- Proteomics identification of oxidatively modified proteins in brain / Rukhsana Sultana, Marzia Perluigi, andD. Allan Butterfield -- Isotope-labeling and affinity enrichment of phosphopeptides for proteomic analysis usingliquid chromatography-tandem mass spectrometry / Uma Kota,Ko-yi Chien, and Michael B. Goshe -- Organelle proteomics : reduction of sample complexity by enzymatic in-gel selection of native proteins / Veronika Reisinger and LutzA. Eichacker -- Isolation of plasma membranes from the nervous system by countercurrent distribution in aqueous polymer two-phase systems / Jens Schindler and Hans Gerd Nothwang -- Enrichment and preparation of plasma membrane proteins from Arabidopsis thaliana for global proteomic analysis using liquid chromatography-tandem mass spectrometry / Srijeet K. Mitra, Steven D. Clouse, and Michael B. Goshe -- Tandem affinity purification of protein complexes from mammalian cells by the strep/FLAG (SF)-TAP tag / Christian Johannes Gloeckner ... [et al.] -- Sequential peptide affinity pruification system for the systematic isolation and identification of protein complexes from Escherichia coli / Mohan Babu ... [et al.] -- Bioinformatical approaches to detect and analyze protein interactions / Beate Kruger and Thomas Dandekar